I was running X and upgraded to PRO.
Everything seemed to be transferred over smoothly (although I am still going through updating and tweaking) … Except:
I can set Body Copy and Heading fonts through the Font Manager, but when I go to theme options > typography, I don’t have the selected fonts in the fonts option select dropdown.
I DO have a complete list of system and Google fonts, and can select from that list without any problem. But the selected fonts from the Font Manager do no carry over.
I just (yesterday) created a new blog and used PRO, and didn’t have any issue with the fonts manager - it worked perfectly (well almost, but that’s the topic of a different support post). So this issue probably has something to do with upgrading from an X theme (that has a lot of custom CSS in it).
Note that this is not really a problem for me - I have a workaround. I am reporting it as a possible bug that you might want to investigate and fix in a future release.