Yes it is possible to move the Header or Footer or the Content section. You will need to use the template system. For more information:
But please consider that the actual menu items which can be found in the Appearance > Menus are part of the WordPress and not the Theme and our theme does not move those elements. The theme move the header style and the elements that you used in the header builder.
By the way, you need to back up and update the Pro theme to version 2.0.4 to be able to use that feature.