I have 6 or 7 custom colors in my color manager. I notice that it works great for some elements, but randomly the custom colors just wont be there as a choice, which really kills my workflow and pace. Notice in the screenshot, the color circles are missing for this border element.
Ive noticed this too on a few sites, and I cant put a rhyme or reason as to why it happens, it just seems random.
Thanks
Chris